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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs57787180 chr8:11789297 A/G SGK223 chr8:8175258-8244008:- -0.45 -8.44 3.84E-16 Box Plot
THCA rs57802814 chr5:151688278 A/G FILIP1L chr3:99548985-99833357:- 0.22 6.28 7.43E-10 Box Plot
THCA rs57819301 chr2:101144549 C/T LOC285359 chr3:101431278-101432259:+ 0.34 6.38 4.09E-10 Box Plot
THCA rs57828786 chr6:151763420 C/CAAT NEK5 chr13:52607747-52703214:- 0.44 6.43 3.01E-10 Box Plot
THCA rs57861255 chr22:24077889 C/A IGLL3 chr22:25713888-25716191:+ 0.71 9.22 9.56E-19 Box Plot
THCA rs5791903 chr11:49464308 TA/TAAA FOLH1B chr11:89372395-89431886:+ -0.34 -6.05 2.96E-9 Box Plot
THCA rs57921719 chr10:51814026 GATCTCGGTTC/G FAM21B chr10:47894023-47949412:+ 0.57 7.45 4.42E-13 Box Plot
THCA rs57924936 chr5:120114302 G/A GABRA6 chr5:160974069-161129599:+ 0.41 5.9 7.04E-9 Box Plot
THCA rs5792779 chr11:77546518 C/CAT INTS4L1 chr7:64601603-64694600:+ 0.43 7.8 3.85E-14 Box Plot
THCA rs5792780 chr11:77578358 AT/A INTS4L1 chr7:64601603-64694600:+ 0.43 7.78 4.46E-14 Box Plot
THCA rs5792781 chr11:77588301 GTTAA/G INTS4L1 chr7:64601603-64694600:+ 0.45 8.09 5.05E-15 Box Plot
THCA rs57928712 chr8:11784989 T/A SGK223 chr8:8175258-8244008:- 0.36 6.44 2.88E-10 Box Plot
THCA rs57931480 chr4:108615226 CT/C MRPL38 chr17:73894724-73901494:- 0.29 6.66 7.37E-11 Box Plot
THCA rs57984765 chr2:132198835 A/G CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs58007588 chr8:11794969 A/G SGK223 chr8:8175258-8244008:- -0.41 -7.54 2.42E-13 Box Plot